Basic Information
Locus ID:
gene_7136
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 769900 | 778213 | - | gene_7136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 142,286.36 Da | 45.91 | 96.52 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 24 | 253 | 6.83778E-85 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 354 | 623 | 1.51761E-93 | - |
| Pfam | PF07723 | Leucine Rich Repeat | 946 | 970 | 7.3E-5 | IPR013101 |
| Pfam | PF00069 | Protein kinase domain | 349 | 620 | 2.1E-49 | IPR000719 |
| Pfam | PF08387 | FBD | 1165 | 1205 | 1.7E-13 | IPR006566 |
| Pfam | PF00139 | Legume lectin domain | 25 | 251 | 3.1E-59 | IPR001220 |
| SUPERFAMILY | SSF81383 | F-box domain | 765 | 809 | 1.96E-10 | IPR036047 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 24 | 252 | 2.75E-61 | IPR013320 |
| SUPERFAMILY | SSF52047 | RNI-like | 888 | 1239 | 6.98E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 330 | 643 | 1.23E-79 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 22 | 254 | 2.6E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 641 | 9.6E-64 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 757 | 805 | 8.8E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 914 | 1164 | 1.7E-7 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 424 | 2.6E-27 | - |
| SMART | SM00579 | 9598neu4hmm | 1166 | 1237 | 1.1E-10 | IPR006566 |
| SMART | SM00220 | serkin_6 | 348 | 630 | 2.2E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 630 | 37.898212 | IPR000719 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 766 | 814 | 11.034144 | IPR001810 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 377 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010675950.2 | probable L-type lectin-domain containing receptor kinase S.7 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MWM2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology