Basic Information
Locus ID:
gene_7076
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 30232127 | 30234577 | + | gene_7076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 31,274.64 Da | 41.79 | 94.66 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 273 | 1.6E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 274 | 6.47E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 275 | 1.9E-99 | - |
| SMART | SM00220 | serkin_6 | 21 | 273 | 1.2E-101 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 4 | 269 | 2.1E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 273 | 48.131229 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 50 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 140 | 152 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29160.3 | SNF1 kinase homolog 11. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. | 0 |
| RefSeq | XP_010686185.2 | SNF1-related protein kinase catalytic subunit alpha KIN10 [Beta vulgaris subsp. vulgaris] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A067G2N4 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010208mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7076 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028174 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g175470 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003033 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73108, Sgl76657 |