Basic Information
Locus ID:
gene_7062
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 11561205 | 11562542 | + | gene_7062 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 27,854.12 Da | 61.09 | 82.85 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 103 | 146 | 5.04384E-17 | - |
| Pfam | PF13639 | Ring finger domain | 103 | 146 | 1.7E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 82 | 157 | 3.76E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 81 | 153 | 2.5E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 104 | 145 | 2.8E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 104 | 146 | 13.197422 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 228 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47560.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_003632375.1 | PREDICTED: RING-H2 finger protein ATL64 [Vitis vinifera] | 0 |
| O22255 | RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1 | 0 | |
| TrEMBL | A0A438KH93 | RING-H2 finger protein ATL2 OS=Vitis vinifera OX=29760 GN=ATL2_2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology