Basic Information
Locus ID:
gene_7036
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Protein of unknown function (DUF1635)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 29701035 | 29702826 | + | gene_7036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 34,762.77 Da | 46.38 | 78.18 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07795 | Protein of unknown function (DUF1635) | 122 | 260 | 8.0E-27 | IPR012862 |
| Pfam | PF07795 | Protein of unknown function (DUF1635) | 12 | 131 | 3.2E-17 | IPR012862 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 167 | - | - |
| Coils | Coil | Coil | 13 | 79 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28690.1 | Protein of unknown function (DUF1635). | 0 |
| RefSeq | XP_010685837.2 | WD repeat-containing protein DDB_G0292056 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A7C8YZW2 | Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg15642, jg35794, jg37953, jg8321 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_15555, gene_7036, gene_7037 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah028098, Ah028099 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_7g174570, BVRB_7g174580 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg1845, Sbi_jg1846, Sbi_jg34683, Sbi_jg34687 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg2912, Seu_jg2913 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00003128, GOSA_00003129 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl72951, Sgl72952, Sgl76491, Sgl76492 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000004503, gene:ENSEOMG00000037300 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.7AG0002180, CQ.Regalona.r1.7AG0002190 ... |
| Apiaceae | Apium graveolens | 5 | Ag10G00510, Ag11G04248, Ag6G02333, Ag6G02336, AgUnG01169 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G002290, scaffold013737G000060 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103705937, gene-LOC103710703, gene-LOC103713413 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.371.V1.1, AsparagusV1_07.308.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G17252, Ftri12G09128 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT2G28690.1, AT5G09940.1, AT5G59760.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10014545m.g.v1.0, Thhalv10015775m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp4g11560.v2.2, Sp4g19740.v2.2, Sp6g21430.v2.2 ... |
| Brassicaceae | Brassica nigra | 8 | BniB02g039440.2N, BniB02g051950.2N, BniB05g026940.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2277 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2451 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g15510, gene.Cymno04g15540 |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate01g08450, gene.Thate01g33650, gene.Thate06g01250 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.1337 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00016120 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G09060, Lb6G31117 |
| Poaceae | Echinochloa crus-galli | 8 | AH05.753, AH09.161, BH05.822, BH09.237, CH02.553, CH05.946 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4AG0326960, gene-QOZ80_4BG0359010 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0008980.1, HORVU.MOREX.r3.3HG0330230.1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_008935, gene-QYE76_058451, gene-QYE76_058452 ... |
| Poaceae | Oryza coarctata | 4 | Oco07G000540, Oco08G000860, Oco09G000770, Oco10G000840 |
| Poaceae | Oryza sativa | 2 | LOC_Os04g05070.1, LOC_Os05g02450.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_06G024100, gene-BS78_09G016500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0502207, Pt_Chr0503662 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G013570, Chr12G023220, Chr18G002480, Chr22G016410 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G089500, Tel1E01G557600, Tel2E01G052000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG004890, gene_TRIDC1BG006860 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS1A02G042800.1, TraesCS1B02G055600.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb088820_P001, Zm00001eb266340_P003 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-18348, nbis-gene-37387, nbis-gene-54068 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g20863, Zma_g26284, Zma_g27587 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG19.1400 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g34710, gene.Posoc07g14750 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_12_RagTag.284, evm.TU.Scaffold_13_RagTag.805 ... |
| Rhizophoraceae | Carallia pectinifolia | 6 | nbisL1-mrna-24512, nbisL1-mrna-30230, nbisL1-mrna-30232 ... |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-12641, nbisL1-mrna-18746, nbisL1-mrna-19683 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-16174, nbisL1-mrna-19563, nbisL1-mrna-9920 |
| Rhizophoraceae | Kandelia candel | 3 | add.evm.TU.utg000009l.309, evm.TU.utg000015l.468 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015229 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-18762, nbisL1-mrna-18968, nbisL1-mrna-21876 ... |
| Rhizophoraceae | Rhizophora mangle | 5 | nbisL1-mrna-11791, nbisL1-mrna-13611, nbisL1-mrna-13614 ... |
| Salicaceae | Populus euphratica | 5 | populus_peu02164, populus_peu04740, populus_peu05999 ... |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132599610, gene-LOC132605911, gene-LOC132643517 |
| Solanaceae | Solanum chilense | 2 | SOLCI001724900, SOLCI001758400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002931, gene-LOC107022556 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.4887_chr03_- |
| Tamaricaceae | Tamarix chinensis | 3 | TC11G0046, TC11G0047, TC11G2245 |