Basic Information
Locus ID:
gene_6992
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 29031484 | 29035952 | + | gene_6992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 51,623.92 Da | 33.88 | 85.80 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 106 | 387 | 2.30191E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 105 | 384 | 6.4E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 85 | 384 | 2.56E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 412 | 2.8E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 80 | 188 | 2.3E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 397 | 38.604912 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 106 | 137 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 415 | - | - |
| Coils | Coil | Coil | 395 | 415 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28940.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010685749.1 | serine/threonine-protein kinase PCRK1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DRU2 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology