Basic Information
Locus ID:
gene_69
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 1118818 | 1125660 | - | gene_69 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 77,160.30 Da | 40.41 | 86.08 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 414 | 685 | 6.5905E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 72 | 3.8E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 155 | 7.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 410 | 682 | 1.4E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 239 | 1.21E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 682 | 3.42E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 253 | 8.4E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 485 | 2.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 708 | 1.0E-58 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 685 | 38.534245 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 293 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021854199.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Spinacia oleracea] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9APV5 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology