Basic Information
Locus ID:
gene_6899
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 27684484 | 27688714 | + | gene_6899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 99,305.67 Da | 40.86 | 86.97 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 608 | 884 | 9.84284E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 603 | 879 | 9.9E-44 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 187 | 431 | 9.59E-24 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 579 | 882 | 7.55E-72 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 136 | 280 | 3.7E-8 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 567 | 678 | 1.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 679 | 892 | 2.1E-48 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 281 | 438 | 7.1E-18 | IPR009091 |
| SMART | SM00220 | serkin_6 | 602 | 886 | 5.0E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 886 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 729 | 741 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 608 | 630 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_021720667.1 | putative serine/threonine-protein kinase-like protein CCR3 [Chenopodium quinoa] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KRI0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology