Basic Information
Locus ID:
gene_683
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 18157498 | 18158572 | - | gene_683 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 35,850.68 Da | 51.74 | 52.44 | -1.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 205 | - | - |
| Coils | Coil | Coil | 256 | 276 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_18400, gene_18664, gene_24620, gene_3959, gene_683 |
| Apiaceae | Apium graveolens | 1 | Ag3G01124 |
| Arecaceae | Cocos nucifera | 7 | COCNU_01G004170, COCNU_01G004180, COCNU_01G004190 ... |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013102, Pov_00020524 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG05.1782 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.44822.1, evm.TU.45225.1 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12784, nbisL1-mrna-12785 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-16414, nbisL1-mrna-16417 |
| Solanaceae | Solanum chilense | 1 | SOLCI001117600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008469, gene-LOC107014036 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.22124_chr09_-, STRG.740_chr01_- |