Basic Information
Locus ID:
gene_6814
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 117635405 | 117640209 | - | gene_6814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 114,878.19 Da | 47.22 | 61.56 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 450 | 482 | 6.6E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 598 | 635 | 8.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 746 | 770 | 0.0081 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 557 | 593 | 1.5E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 445 | 774 | 5.33E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 538 | 820 | 1.1E-50 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 437 | 537 | 6.7E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 637 | 676 | 4.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 596 | 635 | 1.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 555 | 593 | 4.5E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 729 | 770 | 0.0039 | IPR001680 |
| SMART | SM00320 | WD40_4 | 444 | 483 | 4.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 681 | 728 | 6.4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 451 | 492 | 13.983944 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 602 | 636 | 10.917412 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 602 | 636 | 13.148488 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 750 | 770 | 9.138305 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 451 | 485 | 11.523771 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 562 | 597 | 11.523771 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 562 | 602 | 14.78598 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 580 | 594 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 470 | 484 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 622 | 636 | 1.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 470 | 484 | 1.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 580 | 594 | 1.8E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 857 | 889 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 889 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 843 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 947 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 976 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 960 | 976 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 537 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37670.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_021854625.1 | uncharacterized protein LOC110793990 [Spinacia oleracea] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8CGL2 | WD_REPEATS_REGION domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_5g110220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology