Basic Information
Locus ID:
gene_6797
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 26187516 | 26195521 | + | gene_6797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 60,563.75 Da | 42.18 | 76.51 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 210 | 8.3E-73 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 252 | 478 | 4.3E-60 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 268 | 443 | 2.5E-211 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 9 | 481 | 2.5E-211 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 520 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_010686045.2 | proteinaceous RNase P 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology