Basic Information
Locus ID:
gene_6767
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 114294358 | 114310853 | - | gene_6767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 21,177.59 Da | 42.62 | 61.41 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 22 | 152 | 1.60248E-53 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 153 | 6.0E-34 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 14 | 153 | 5.23E-46 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 6 | 152 | 5.8E-57 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 22 | 153 | 4.3E-44 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 153 | 54.416058 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 185 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021749852.1 | jacalin-related lectin 19-like [Chenopodium quinoa] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IJ43 | Jacalin-type lectin domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003617 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology