Basic Information
Locus ID:
gene_6765
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 25529420 | 25550444 | + | gene_6765 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 136,672.89 Da | 46.39 | 101.18 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 167 | 396 | 4.0E-29 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 445 | 1070 | 2.95E-25 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 150 | 394 | 1.21E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 424 | 637 | 8.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 742 | 1122 | 1.7E-15 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 323 | 2.9E-22 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 329 | 407 | 4.5E-7 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 359 | 373 | 1.3E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 267 | 281 | 1.3E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 539 | 555 | 1.3E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 182 | 197 | 1.3E-17 | - |
| Coils | Coil | Coil | 26 | 60 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G43730.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_021716646.1 | probable disease resistance protein At4g27220 [Chenopodium quinoa] | 0 |
| Q9FG91 | Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana OX=3702 GN=At5g43730 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8LXH1 | uncharacterized protein LOC107931798 isoform X5 OS=Gossypium hirsutum OX=3635 GN=LOC107931798 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology