Basic Information
Locus ID:
gene_6666
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 24061742 | 24070382 | + | gene_6666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 76,002.63 Da | 39.66 | 87.33 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 409 | 673 | 2.14768E-85 | - |
| CDD | cd12087 | TM_EGFR-like | 279 | 309 | 0.00133263 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 405 | 670 | 3.5E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 8.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 114 | 173 | 1.8E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 230 | 2.09E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 670 | 2.19E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 251 | 6.5E-51 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 696 | 4.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 479 | 5.3E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 403 | 673 | 34.039631 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 701 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021761852.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Chenopodium quinoa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M9M6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology