Basic Information
Locus ID:
gene_664
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 17228960 | 17235336 | - | gene_664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 72,199.08 Da | 43.97 | 87.52 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 35 | 141 | 6.07486E-47 | - |
| Pfam | PF03000 | NPH3 family | 231 | 496 | 1.2E-97 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 43 | 131 | 4.1E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 32 | 132 | 3.77E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 20 | 139 | 1.9E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 44 | 139 | 0.0097 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 44 | 115 | 11.998606 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 231 | 520 | 94.872108 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 652 | - | - |
| Coils | Coil | Coil | 561 | 595 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_010687037.1 | BTB/POZ domain-containing protein At1g30440 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803N9X6 | BTB/POZ domain-containing protein At1g30440 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology