Basic Information
Locus ID:
gene_6607
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 23084165 | 23087106 | + | gene_6607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 72,378.23 Da | 35.90 | 96.02 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 80 | 4.5E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 131 | 192 | 1.1E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 562 | 3.2E-26 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 243 | 1.5E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 366 | 638 | 3.42E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 248 | 5.5E-7 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 437 | 2.2E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 649 | 6.0E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 202 | 1.3E-33 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 621 | 25.432026 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010696133.2 | pollen receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R6G9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology