Basic Information
Locus ID:
gene_6605
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 23026338 | 23035881 | + | gene_6605 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 81,490.51 Da | 43.22 | 83.96 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 146 | 182 | 1.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 58 | 98 | 4.2E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 188 | 230 | 3.3E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 437 | 703 | 2.5E-40 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 277 | 3.94E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 703 | 1.09E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 305 | 1.0E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 394 | 511 | 2.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 712 | 3.2E-54 | - |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 5.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 217 | 240 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 2.2 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 704 | 35.763981 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 171 | 193 | 7.265315 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 172 | 185 | 4.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 193 | 206 | 4.3E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_021720269.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X2 [Chenopodium quinoa] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R6G6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology