Basic Information
Locus ID:
gene_6576
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 90300351 | 90314147 | - | gene_6576 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 64,507.16 Da | 39.27 | 82.07 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 52 | 356 | 1.8471E-134 | - |
| CDD | cd00051 | EFh | 476 | 538 | 5.7243E-20 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 475 | 538 | 8.2E-16 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 53 | 357 | 4.2E-71 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 405 | 463 | 9.4E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 364 | 1.12E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 386 | 564 | 7.28E-45 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 366 | 540 | 1.9E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 365 | 2.7E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 138 | 3.5E-28 | - |
| SMART | SM00054 | efh_1 | 476 | 504 | 9.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 404 | 432 | 0.0031 | IPR002048 |
| SMART | SM00054 | efh_1 | 512 | 540 | 7.3E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 53 | 357 | 3.3E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 440 | 468 | 4.5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 400 | 435 | 12.78389 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 436 | 471 | 8.515894 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 472 | 507 | 14.262346 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 357 | 49.544628 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 508 | 543 | 14.122869 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 82 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 521 | 533 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 485 | 497 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 449 | 461 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_030952006.1 | calcium-dependent protein kinase 8-like [Quercus lobata] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5C3P1 | Calcium-dependent protein kinase 8 OS=Nyssa sinensis OX=561372 GN=F0562_001223 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology