Basic Information
Locus ID:
gene_6548
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 22078278 | 22080302 | + | gene_6548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 49,975.59 Da | 52.36 | 83.39 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 28 | 60 | 4.4E-7 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 324 | 378 | 2.7E-9 | IPR005174 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 81 | 4.97E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 63 | 3.3E-5 | - |
| SMART | SM00256 | fbox_2 | 28 | 68 | 0.0016 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 22 | 62 | 8.543671 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A0E0AAM8 | DUF295 domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.