Basic Information
Locus ID:
gene_6438
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 61773164 | 61832284 | - | gene_6438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 81,247.93 Da | 44.83 | 110.42 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 343 | 1.7E-30 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 356 | 621 | 8.6E-70 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 167 | 4.8E-40 | IPR032880 |
| Coils | Coil | Coil | 275 | 295 | - | - |
| Coils | Coil | Coil | 232 | 252 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_010661092.1 | PREDICTED: CSC1-like protein HYP1 isoform X1 [Vitis vinifera] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | F6H5W0 | CSC1-like protein HYP1 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology