Basic Information
Locus ID:
gene_6396
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 47828230 | 47837129 | - | gene_6396 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 104,869.15 Da | 50.28 | 61.85 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 725 | 769 | 5.11806E-4 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 722 | 761 | 6.09E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 43 | 249 | 6.91E-9 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 712 | 771 | 1.3E-10 | - |
| SMART | SM00333 | TUDOR_7 | 720 | 778 | 0.0071 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 849 | 884 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 846 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 969 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 725 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 907 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 537 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_006450299.1 | muscle M-line assembly protein unc-89 [Citrus clementina] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | V4WB02 | Tudor domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007391mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology