Basic Information
Locus ID:
gene_6370
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
neutrophil clearance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 36047543 | 36051199 | - | gene_6370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 101,646.11 Da | 38.16 | 85.79 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 592 | 865 | 1.21865E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 335 | 373 | 0.004 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 199 | 219 | 0.26 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 178 | 7.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 588 | 860 | 8.9E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 54 | 75 | 0.0017 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 336 | 444 | 8.51E-18 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 312 | 3.67E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 565 | 871 | 1.32E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 462 | 6.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 546 | 663 | 3.6E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 327 | 5.6E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 664 | 888 | 5.7E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 197 | 220 | 8.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 148 | 173 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 586 | 866 | 9.3E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 124 | 147 | 0.52 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 424 | 190.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 103 | 125 | 7.742758 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 586 | 866 | 40.569538 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 592 | 614 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 926 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 933 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 560 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010685103.2 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RIU5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_061690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology