Basic Information
Locus ID:
gene_6267
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 16005738 | 16009069 | - | gene_6267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 44,398.43 Da | 41.88 | 99.13 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 197 | 255 | 2.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 133 | 186 | 1.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 2.6E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 265 | 9.3E-39 | - |
| SUPERFAMILY | SSF52075 | Outer arm dynein light chain 1 | 219 | 373 | 8.63E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 218 | 363 | 1.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 217 | 1.7E-39 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 151 | 173 | 7.588744 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 152 | 165 | 7.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 242 | 255 | 7.9E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_012092328.1 | LRR receptor-like serine/threonine-protein kinase SIK1 [Jatropha curcas] | 0 |
| TrEMBL | A0A2N9IHD8 | LRRNT_2 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51607 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology