Basic Information
Locus ID:
gene_6252
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 14388320 | 14395165 | - | gene_6252 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 126,537.23 Da | 40.71 | 83.06 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 510 | 755 | 1.87025E-121 | - |
| Pfam | PF04548 | AIG1 family | 533 | 667 | 7.3E-22 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 895 | 1159 | 3.6E-124 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 521 | 667 | 6.18E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 507 | 762 | 2.2E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 422 | 1172 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 530 | 764 | 29.710217 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 461 | - | - |
| Coils | Coil | Coil | 857 | 877 | - | - |
| Coils | Coil | Coil | 453 | 473 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_031280532.1 | translocase of chloroplast 159, chloroplastic [Pistacia vera] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HFD5 | AIG1-type G domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_020933 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology