Basic Information
Locus ID:
gene_6214
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Serine threonine-protein phosphatase 7 long form homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 12785920 | 12829429 | + | gene_6214 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 101,792.50 Da | 47.31 | 89.03 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 468 | 592 | 1.3E-15 | IPR019557 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 31 | 171 | 2.9E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 303 | 780 | 1.45E-17 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 182 | 6.83E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 291 | 2.3E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 582 | 800 | 1.2E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 297 | 423 | 9.4E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 106 | 2.0E-10 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 330 | 781 | 12.018861 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 823 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 820 | 863 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48120.1 | hydrolases;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_021854707.1 | probable serine/threonine-protein kinase PBL11 [Spinacia oleracea] | 0 |
| Q9LNG5 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QT04 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_144430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_22859, gene_3677, gene_6214 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah006596, Ah026904, Ah033066 |
| Amaranthaceae | Salicornia bigelovii | 69 | Sbi_jg10574, Sbi_jg13161, Sbi_jg14289, Sbi_jg1461, Sbi_jg387 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15751, Seu_jg21945 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026342 |
| Apiaceae | Apium graveolens | 1 | Ag9G00627 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G10686, Lb3G16601 |
| Poaceae | Oryza coarctata | 2 | Oco13G014430, Oco16G012190 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132599869, gene-LOC132609715, gene-LOC132622063 |
| Solanaceae | Solanum chilense | 2 | SOLCI003030300, SOLCI005764100 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC114074771, gene-LOC114075281, gene-LOC114078436 |