halophFGD

Basic Information

Locus ID: gene_6163

Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544

Genome Assembly: Koichi Toyokura Assembly

Description: Serine/Threonine protein kinases, catalytic domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Super-Scaffold_15_Chr_7S	10228818	10230888	+	gene_6163

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.24	10,872.59 Da	41.53	112.12	0.45

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	24	66	3.0E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	3	79	1.04E-8	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	3	66	6.6E-8	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K08819 (cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23])

Best hit

Source	Best Hit ID	Description
TAIR	AT1G71530.4	-
RefSeq	XP_010678314.1	probable serine/threonine-protein kinase At1g54610 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	F4I114	Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1
TrEMBL	A0A7C9D1K5	Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	1	gene_6163
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate03g12390
Poaceae	Triticum dicoccoides	1	gene_TRIDC3AG006230