Basic Information
Locus ID:
gene_5994
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 624940 | 628698 | + | gene_5994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 90,708.39 Da | 37.24 | 93.55 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 182 | 384 | 2.48854E-71 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 515 | 778 | 1.00346E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 511 | 720 | 2.3E-49 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 166 | 394 | 4.6E-54 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 166 | 393 | 3.26E-60 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 491 | 812 | 1.04E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 164 | 404 | 6.7E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 585 | 799 | 1.3E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 475 | 584 | 5.4E-32 | - |
| SMART | SM00220 | serkin_6 | 509 | 778 | 3.7E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 509 | 787 | 38.152626 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 515 | 538 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 273 | 279 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 628 | 640 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021730613.1 | L-type lectin-domain containing receptor kinase VIII.1-like [Chenopodium quinoa] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9W776 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G063500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology