Basic Information
Locus ID:
gene_552
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 95124957 | 95133087 | - | gene_552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 77,569.84 Da | 44.49 | 86.71 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 684 | 1.5E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 156 | 198 | 3.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 229 | 1.02E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 399 | 684 | 2.87E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 246 | 5.5E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 705 | 4.9E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 493 | 8.0E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 185 | 207 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 1.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 687 | 33.71455 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 187 | 209 | 7.496336 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 277 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021847454.1 | protein STRUBBELIG-RECEPTOR FAMILY 7 [Spinacia oleracea] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZV23 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology