Basic Information
Locus ID:
gene_5484
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 93058143 | 93072259 | - | gene_5484 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 10,663.36 Da | 41.44 | 118.18 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 9 | 98 | 2.98E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 99 | 9.1E-15 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53440.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_030460953.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Syzygium oleosum] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A059D0Z5 | Protein kinase domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B00972 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah036118 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g209520 |
| Apiaceae | Apium graveolens | 1 | Ag11G03669 |
| Brassicaceae | Brassica nigra | 1 | BniB04g047740.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0774 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013418 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0055280 |
| Poaceae | Oryza coarctata | 1 | Oco03G010770 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g13330.1 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG005730, gene_TRIDC6AG044300 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS5D02G077200.2 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7939 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2877 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-7737, nbisL1-mrna-9073 |
| Salicaceae | Populus euphratica | 1 | populus_peu32284 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5484 |
| Zosteraceae | Zostera marina | 1 | Zosma03g29380.v3.1 |