Basic Information
Locus ID:
gene_5357
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 20591055 | 20600745 | - | gene_5357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 135,858.08 Da | 50.22 | 72.29 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 189 | 285 | 1.57791E-48 | - |
| CDD | cd13999 | STKc_MAP3K-like | 958 | 1215 | 3.08128E-107 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 954 | 1215 | 1.4E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 202 | 284 | 3.0E-20 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 944 | 1214 | 7.96E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 201 | 288 | 5.89E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1040 | 1233 | 5.3E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 945 | 1039 | 4.0E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 204 | 286 | 6.2E-13 | - |
| SMART | SM00666 | PB1_new | 200 | 287 | 6.1E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 952 | 1221 | 2.7E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 952 | 1222 | 41.262104 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 958 | 983 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1077 | 1089 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1034 | 1047 | 1.8E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1186 | 1208 | 1.8E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1071 | 1089 | 1.8E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1142 | 1164 | 1.8E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 627 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 621 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021767464.1 | uncharacterized protein LOC110731868 [Chenopodium quinoa] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MLL6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology