Basic Information
Locus ID:
gene_5203
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 17101249 | 17108053 | - | gene_5203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 161,867.58 Da | 43.55 | 76.23 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14686 | bZIP | 1178 | 1213 | 0.00255939 | - |
| CDD | cd01853 | Toc34_like | 849 | 1099 | 1.60524E-121 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1242 | 1506 | 6.0E-119 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 880 | 1014 | 4.7E-22 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 873 | 1032 | 1.23E-14 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 856 | 1109 | 5.2E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 767 | 1512 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 877 | 1112 | 29.412048 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 728 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 662 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 696 | 710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 807 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 728 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 214 | - | - |
| Coils | Coil | Coil | 673 | 693 | - | - |
| Coils | Coil | Coil | 314 | 334 | - | - |
| Coils | Coil | Coil | 1194 | 1214 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_010690914.1 | translocase of chloroplast 159, chloroplastic [Beta vulgaris subsp. vulgaris] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L9X4 | AIG1-type G domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology