Basic Information
Locus ID:
gene_5198
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 16936933 | 16940847 | - | gene_5198 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 77,287.17 Da | 44.07 | 88.53 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 367 | 635 | 6.094E-95 | - |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 226 | 266 | 3.7E-10 | IPR032872 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 49 | 105 | 1.3E-9 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 364 | 561 | 1.9E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 347 | 633 | 3.2E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 323 | 436 | 5.5E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 646 | 4.0E-58 | - |
| SMART | SM00220 | serkin_6 | 361 | 633 | 1.2E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 361 | 643 | 36.188 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 367 | 389 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 482 | 494 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 687 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021837620.1 | putative receptor-like protein kinase At4g00960 [Spinacia oleracea] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A1R3H3M2 | Cysteine-rich receptor-like protein kinase 10 OS=Corchorus olitorius OX=93759 GN=COLO4_31714 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.