Basic Information
Locus ID:
gene_5197
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 16927429 | 16931570 | - | gene_5197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 58,534.21 Da | 50.37 | 87.99 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 293 | 422 | 8.0E-27 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 52 | 113 | 3.1E-14 | IPR025287 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 176 | 265 | 1.6E-12 | IPR032872 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 493 | 4.45E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 304 | 507 | 5.3E-57 | - |
| SMART | SM00220 | serkin_6 | 238 | 493 | 2.6E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 194 | 503 | 19.962168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 342 | 354 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021837620.1 | putative receptor-like protein kinase At4g00960 [Spinacia oleracea] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5B7BZ84 | Putative cysteine-rich receptor-like protein kinase 10 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_043378 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.