Basic Information
Locus ID:
gene_5137
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 23673107 | 23677864 | - | gene_5137 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 59,313.98 Da | 31.96 | 82.79 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 431 | 493 | 6.29558E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 54 | 311 | 1.58941E-141 | - |
| Pfam | PF13833 | EF-hand domain pair | 371 | 419 | 4.4E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 54 | 312 | 3.1E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 493 | 1.1E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 337 | 505 | 3.09E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 320 | 1.75E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 495 | 3.7E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 1.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 139 | 1.7E-28 | - |
| SMART | SM00054 | efh_1 | 359 | 387 | 0.69 | IPR002048 |
| SMART | SM00220 | serkin_6 | 54 | 312 | 3.2E-103 | IPR000719 |
| SMART | SM00054 | efh_1 | 467 | 495 | 1.8E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 395 | 423 | 1.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 0.0024 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 10.078037 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 50.562279 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 12.895472 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 14.652882 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 12.532831 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 83 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 404 | 416 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_031270949.1 | calcium-dependent protein kinase 32-like [Pistacia vera] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GF31 | Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23677 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology