Basic Information
Locus ID:
gene_5118
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_15_Chr_7S | 14768170 | 14770328 | - | gene_5118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 46,023.66 Da | 43.89 | 100.75 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 153 | 174 | 0.11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 198 | 256 | 4.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 72 | 2.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 374 | 8.28E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 380 | 5.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 196 | 5.2E-35 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 152 | 175 | 7.557941 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 153 | 166 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 243 | 256 | 3.9E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_021743935.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C9CJH7 | 2-alkenal reductase (NAD(P)(+)) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology