Basic Information
Locus ID:
gene_505
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 89441726 | 89446991 | - | gene_505 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 47,174.63 Da | 40.26 | 94.59 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17939 | DEADc_EIF4A | 47 | 245 | 4.41428E-135 | - |
| CDD | cd18787 | SF2_C_DEAD | 256 | 386 | 1.80951E-59 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 269 | 377 | 1.3E-28 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 68 | 229 | 1.2E-40 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 112 | 397 | 6.19E-74 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 252 | 416 | 4.9E-57 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 33 | 251 | 6.5E-67 | IPR027417 |
| SMART | SM00487 | ultradead3 | 62 | 259 | 8.1E-57 | IPR014001 |
| SMART | SM00490 | helicmild6 | 296 | 377 | 1.9E-30 | IPR001650 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 43 | 71 | 10.121229 | IPR014014 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 74 | 244 | 28.880865 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 255 | 416 | 25.223057 | IPR001650 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 190 | 198 | - | IPR000629 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.3 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_012847101.1 | PREDICTED: eukaryotic initiation factor 4A-2-like [Erythranthe guttata] | 0 |
| Q40467 | Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9H6V3 | Translation initiation factor 4F, helicase subunit (eIF-4A) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14155 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology