Basic Information
Locus ID:
gene_4950
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 126829943 | 126834480 | + | gene_4950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 67,517.44 Da | 46.81 | 83.54 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 23 | 279 | 2.20088E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 24 | 278 | 2.6E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 359 | 6.2E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 335 | 7.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 103 | 5.9E-23 | - |
| SMART | SM00220 | serkin_6 | 24 | 283 | 5.7E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 283 | 45.982861 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 53 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 145 | 157 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 383 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021728951.1 | serine/threonine-protein kinase Nek6-like [Chenopodium quinoa] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803KM41 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology