Basic Information
Locus ID:
gene_4682
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 35892450 | 35901080 | - | gene_4682 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 77,274.79 Da | 49.98 | 82.06 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 59 | 314 | 1.02453E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 60 | 313 | 5.1E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 342 | 1.35E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 325 | 9.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 40 | 139 | 7.5E-23 | - |
| SMART | SM00220 | serkin_6 | 60 | 314 | 2.0E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 314 | 47.382126 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 564 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 563 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021740915.1 | serine/threonine-protein kinase Nek6-like [Chenopodium quinoa] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9EX64 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology