Basic Information
Locus ID:
gene_4663
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CPK14
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 35455295 | 35459562 | - | gene_4663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 59,553.28 Da | 33.39 | 83.89 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 431 | 493 | 5.4298E-19 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 53 | 311 | 5.78295E-140 | - |
| Pfam | PF00069 | Protein kinase domain | 55 | 312 | 1.1E-77 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 372 | 422 | 2.7E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 493 | 8.1E-16 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 320 | 2.16E-89 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 336 | 505 | 5.07E-43 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 139 | 4.3E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 495 | 1.4E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 2.4E-60 | - |
| SMART | SM00220 | serkin_6 | 54 | 312 | 8.1E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 395 | 423 | 0.086 | IPR002048 |
| SMART | SM00054 | efh_1 | 467 | 495 | 1.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 359 | 387 | 1.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 8.0E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 14.680779 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 13.202322 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 9.99435 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 49.94038 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 83 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 404 | 416 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_010667055.1 | calcium-dependent protein kinase 8 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NLQ6 | Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana OX=3702 GN=CPK32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8B6S5 | Calcium-dependent protein kinase 30 OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_006440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology