Basic Information
Locus ID:
gene_4642
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 107556432 | 107571981 | + | gene_4642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 100,730.34 Da | 37.27 | 95.87 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 581 | 845 | 1.00881E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 578 | 844 | 2.8E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 224 | 283 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 336 | 2.38E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 560 | 883 | 3.73E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 333 | 3.1E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 547 | 650 | 1.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 138 | 2.1E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 651 | 858 | 7.0E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 245 | 2.7E-27 | IPR032675 |
| SMART | SM00220 | serkin_6 | 575 | 847 | 4.1E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 575 | 847 | 37.474194 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 581 | 603 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 695 | 707 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038719410.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Tripterygium wilfordii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B8Q9L7 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Rhodamnia argentea OX=178133 GN=LOC115750535 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology