Basic Information
Locus ID:
gene_4641
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 107526155 | 107535281 | + | gene_4641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 105,629.08 Da | 36.83 | 96.77 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 890 | 2.73527E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 65 | 5.6E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 269 | 326 | 9.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 207 | 2.5E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 887 | 2.8E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 382 | 2.89E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 926 | 1.78E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 378 | 1.1E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 903 | 7.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 186 | 3.2E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 287 | 4.3E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 693 | 1.8E-34 | - |
| SMART | SM00220 | serkin_6 | 618 | 894 | 5.1E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 891 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038693029.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Tripterygium wilfordii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B8Q9L7 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Rhodamnia argentea OX=178133 GN=LOC115750535 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology