Basic Information
Locus ID:
gene_4526
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 101063866 | 101066551 | + | gene_4526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 67,547.49 Da | 51.26 | 85.05 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 215 | 481 | 3.0E-94 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 117 | 1.8E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 133 | 2.0E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 215 | 505 | 95.244026 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 100 | 10.654275 | IPR000210 |
| Coils | Coil | Coil | 542 | 569 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_020553362.1 | BTB/POZ domain-containing protein At5g03250 [Sesamum indicum] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J4ZH21 | NPH3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_016947 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology