Basic Information
Locus ID:
gene_4480
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 31888164 | 31890078 | - | gene_4480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 34,964.82 Da | 55.08 | 67.25 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 127 | 172 | 3.5E-11 | IPR006652 |
| Pfam | PF00646 | F-box domain | 13 | 53 | 1.3E-5 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 113 | 272 | 4.45E-28 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 52 | 2.09E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 87 | 288 | 9.7E-28 | IPR015915 |
| SMART | SM00612 | kelc_smart | 138 | 185 | 1.5E-6 | IPR006652 |
| SMART | SM00256 | fbox_2 | 15 | 55 | 3.0E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 8.570165 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010693831.1 | F-box/kelch-repeat protein At2g44130 [Beta vulgaris subsp. vulgaris] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7J0F5X2 | F-box domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_09g0000350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology