Basic Information
Locus ID:
gene_4296
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 82987312 | 82992531 | + | gene_4296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 119,252.44 Da | 38.27 | 96.80 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 292 | 350 | 8.1E-12 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 743 | 1030 | 2.2E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 95 | 1.3E-4 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 101 | 453 | 5.73E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 743 | 1032 | 6.34E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 389 | 646 | 1.7E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 361 | 658 | 4.6E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 214 | 9.3E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 829 | 1047 | 4.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 740 | 828 | 2.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 215 | 360 | 2.2E-41 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 460 | 484 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 508 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 363 | 387 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 265 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 740 | 1036 | 4.2E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 388 | 411 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 580 | 603 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 740 | 1036 | 37.50246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 882 | 894 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 269 | 282 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 314 | 327 | 1.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017973822.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Theobroma cacao] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3JTQ9 | Protein kinase domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_14099 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology