Basic Information
Locus ID:
gene_4260
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 78025682 | 78030470 | + | gene_4260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 109,995.44 Da | 32.75 | 99.82 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 2.2E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 708 | 985 | 1.3E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 474 | 496 | 1.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 197 | 211 | 1.8 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 294 | 309 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 342 | 401 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 522 | 581 | 1.8E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 251 | 621 | 1.26E-64 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 312 | 3.85E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 702 | 987 | 2.16E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 789 | 2.5E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 232 | 2.6E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 466 | 4.3E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 142 | 2.0E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 387 | 1.4E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 470 | 648 | 1.6E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 996 | 2.8E-61 | - |
| SMART | SM00369 | LRR_typ_2 | 496 | 520 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 245 | 269 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 568 | 592 | 110.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 269 | 295 | 250.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 99 | 125 | 63.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 472 | 498 | 38.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 196 | 222 | 410.0 | - |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 150.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 544 | 576 | 150.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 148 | 180 | 58.0 | - |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 706 | 987 | 2.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 997 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_038689625.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Tripterygium wilfordii] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A067GBX9 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g012213mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology