Basic Information
Locus ID:
gene_4179
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 63477729 | 63490519 | + | gene_4179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 93,191.89 Da | 43.17 | 82.47 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 554 | 687 | 1.53342E-22 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 556 | 686 | 1.5E-37 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 708 | 751 | 1.6E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 516 | 760 | 1.35E-58 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 516 | 804 | 9.4E-96 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 689 | 801 | 9.4E-96 | - |
| SMART | SM00382 | AAA_5 | 552 | 689 | 7.4E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 659 | 678 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 499 | - | - |
| Coils | Coil | Coil | 747 | 767 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_018847323.2 | nuclear valosin-containing protein-like [Juglans regia] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A2I4GTV6 | nuclear valosin-containing protein-like OS=Juglans regia OX=51240 GN=LOC109010848 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology