Basic Information
Locus ID:
gene_4136
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 15543882 | 15554134 | - | gene_4136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 189,385.30 Da | 52.47 | 76.78 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 386 | 658 | 1.98755E-130 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1423 | 1686 | 1.42381E-149 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 407 | 647 | 5.1E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1629 | 1684 | 1.8E-6 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1462 | 1627 | 6.6E-35 | IPR002498 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 37 | 109 | 3.89E-6 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 452 | 624 | 4.97E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1418 | 1686 | 3.07E-81 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1384 | 1543 | 3.1E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1544 | 1687 | 1.9E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 451 | 624 | 1.9E-51 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1387 | 1687 | 1.3E-118 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 35 | 105 | 8.59406 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1363 | 1686 | 58.747417 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1129 | 1161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1129 | 1172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 131 | - | - |
| Coils | Coil | Coil | 1067 | 1087 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_048502539.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology