Basic Information
Locus ID:
gene_4047
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 21277415 | 21280494 | + | gene_4047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 42,920.26 Da | 45.25 | 74.61 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 50 | 323 | 4.9E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 359 | 2.7E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 329 | 6.0E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 126 | 8.3E-25 | - |
| SMART | SM00220 | serkin_6 | 48 | 323 | 1.0E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 48 | 337 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 54 | 76 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 384 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_010682258.2 | rust resistance kinase Lr10 [Beta vulgaris subsp. vulgaris] | 0 |
| P93604 | Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M746 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology