Basic Information
Locus ID:
gene_4004
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 13788599 | 13792941 | + | gene_4004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 111,615.07 Da | 36.82 | 91.26 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 676 | 949 | 3.52777E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 97 | 132 | 3.5E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 178 | 217 | 4.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 456 | 495 | 1.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 396 | 433 | 2.7E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 671 | 944 | 8.5E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 644 | 955 | 1.06E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 131 | 504 | 3.4E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 95 | 394 | 6.0E-82 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 748 | 963 | 1.7E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 631 | 747 | 3.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 396 | 520 | 9.9E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 205 | 229 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 482 | 504 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 670 | 950 | 1.4E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 0.0025 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 327 | 350 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 256 | 279 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 458 | 481 | 50.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 670 | 950 | 39.876972 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 676 | 698 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 795 | 807 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 552 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_028092959.1 | receptor protein kinase TMK1-like [Camellia sinensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V3WL36 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_026389 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology