Basic Information
Locus ID:
gene_3941
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 8295986 | 8304308 | - | gene_3941 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 60,532.67 Da | 44.21 | 71.18 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 105 | 243 | 9.7E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 89 | 262 | 1.18E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 113 | 266 | 5.4E-30 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 104 | 262 | 30.45323 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 365 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_010695823.2 | SUPPRESSOR OF GAMMA RESPONSE 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YLE4 | NAC domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology