HalophFGD

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Basic Information
Locus ID: gene_3917
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_10_Chr_8 7595082 7599030 - gene_3917
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.37 43,330.46 Da 36.62 94.07 -0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 149 269 1.8E-12 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_050247852.1 F-box protein At3g07870-like isoform X2 [Quercus robur] 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 18 gene_18345, gene_18346, gene_18375, gene_18411, gene_18412 ...
gene_18414, gene_18416, gene_18417, gene_18418, gene_18419, gene_18549, gene_18551, gene_18554, gene_3917, gene_3918, gene_3919, gene_3977, gene_3978
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.